Discussion related to cado-nfs

[Jhon Alejandro M <alejandromelo@unicauca.edu.co>]

Hello, I am trying to install cado 2.3.0 but at 92% of the installation I have the following error:

[92%] Linking CXX executable acollect
/usr/bin/ld: libbwc_base.a(bw-common.c.o):/home/debian/Downloads/cado-nfs-2.3.0/linalg/bwc/bw-common.c:21: multiple definitions of `bw '; CMakeFiles/acollect.dir/acollect.c.o:/home/debian/Descargas/cado-nfs-2.3.0/linalg/bwc/acollect.c:30: first defined here
collect2: error: ld returned 1 exit status
make[2]: *** [linalg/bwc/CMakeFiles/acollect.dir/build.make:143: linalg/bwc/acollect] Error 1
make[1]: *** [CMakeFiles/Makefile2:4085: linalg/bwc/CMakeFiles/acollect.dir/all] Error 2
make: *** [Makefile:146: all] Error 2
make: *** [Makefile:7: all] Error 2

make cmake output:
CMake Warning:
   Ignoring empty string ("") provided on the command line.


CMake Deprecation Warning at CMakeLists.txt:15 (cmake_minimum_required):
   Compatibility with CMake < 2.8.12 will be removed from a future version of
   CMake.

   Update the VERSION argument <min> value or use a ...<max> suffix to tell
   CMake that the project does not need compatibility with older versions.


-- Configuring CADO revision 2acb184f4
-- PREFIX=/home/debian/Downloads/cado-nfs-2.3.0/installed (from environment)
-- CFLAGS=-O2 (from environment)
-- CXXFLAGS=-O2 (from environment)
-- MAKE=make (from environment)
-- C compiler: GNU 12.2.0
-- C++ compiler: GNU 12.2.0
--Enabling C++11 support
-- CFLAGS=-std=c99 -g -W -Wall -O2 (synthetized)
-- CXXFLAGS=-std=c++11 -g -W -Wall -O2 -Wno-literal-suffix (synthetized)
-- GMP_INCDIR=/usr/local/include
-- GMP_LIBDIR=/usr/local/lib
-- bits in unsigned long: 64
-- bits in unsigned long long: 64
-- Testing for gmp_random predictability
-- Testing for gmp_random predictability -- ok
-- Testing whether sse-2 code can be used
-- Testing whether sse-2 code can be used -- Yes
-- Testing whether sse-3 code can be used
-- Testing whether sse-3 code can be used -- Yes, with -msse3
-- Testing whether ssse-3 code can be used
-- Testing whether ssse-3 code can be used -- Yes, with -mssse3
-- Testing whether sse-4.1 code can be used
-- Testing whether sse-4.1 code can be used -- Yes, with -msse4.1
-- Testing whether avx code can be used
-- Testing whether avx code can be used -- Yes, with -mavx
-- Testing whether avx2 code can be used
-- Testing whether avx2 code can be used -- Yes, with -mavx2
-- Testing whether pclmul code can be used
-- Testing whether pclmul code can be used -- Yes, with -mpclmul
-- Trying to compile gcc-style x86_64 inline assembly
-- Trying to compile gcc-style x86_64 inline assembly -- Success
-- Testing known bugs for compiler
-- Testing known bugs for compiler -- None found
-- Trying to compile gas-syntax assembly sources
-- Trying to compile gas-syntax assembly sources -- Success
-- Checking for alloca.h
-- Checking for alloca.h -- found in /usr/include
-- Looking for log2
-- Looking for log2 - requires m
-- Looking for exp2
-- Looking for exp2 - requires m
-- Looking for cabsl
-- Looking for cabsl - requires m
-- Looking for clog
-- Looking for clog - requires m
-- Looking for nanosleep
-- Looking for nanosleep - found
-- Looking for usleep
-- Looking for usleep - found
-- Looking for popen
-- Looking for popen - found
-- Looking for pclose
-- Looking for pclose - found
-- Looking for getrusage
-- Looking for getrusage - found
-- Looking for lrand48
-- Looking for lrand48 - found
-- Looking for strdup
-- Looking for strdup - found
-- Looking for strndup
-- Looking for strndup - found
-- Looking for follow action
-- Looking for follow action - found
-- Looking for waitpid
-- Looking for waitpid - found
-- Looking for ctime_r
-- Looking for ctime_r - found
-- Looking for realpath
-- Looking for realpath - found
-- Looking for mmap
-- Looking for mmap - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Testing whether RUSAGE_THREAD can be used
-- Trying to compile with RUSAGE_THREAD -- Success
-- Testing the existence of __sync_fetch functions
-- Testing the existence of __sync_fetch functions -- Success
-- Testing the existence of asprintf/vasprintf functions
-- Testing the existence of asprintf/vasprintf functions -- Success
-- Checking for MinGW
-- Checking for MinGW -- no
-- Testing if rand() gives true alea
-- Testing if rand() gives true alea -- Probably
-- Testing if srand() yields a deterministic sequence
-- Testing if srand() yields a deterministic sequence -- Yes
-- Testing if an int can be read from and written to an odd address
-- Testing if an int can be read from and written to an odd address -- Yes
-- HWLOC_INCDIR=HWLOC_INCDIR-NOTFOUND
-- HWLOC_LIB=HWLOC_LIB-NOTFOUND
-- /usr/bin/python3 --version returned: Python 3.11.2
-- Importing module sqlite3 in Python succeeded.
--Perl version is 5.36.0
-- Building with static libraries (ENABLE_SHARED="")
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Looking for pthread_barrier_wait
-- Looking for pthread_barrier_wait - found
-- MPI is not enabled
-- Using libs: (math) (pthreads)
-- GF(p) implementations enabled for DL linear algebra: p_1, p_2, p_3, p_4, p_5, p_6, p_7, p_8, p_9, p_10, p_11, p_12, p_13, p_14, p_15, pz
-- GF(p) SpMV backends for DL linear algebra: basicp, zone
-- GF(2) implementations enabled for linear algebra: u64k1, u64k2, u64k3, u64k4
-- GF(2) SpMV backends for linear algebra: bucket, basic, sliced
-- Main scripts will go to /home/debian/Downloads/cado-nfs-2.3.0/installed/bin
-- Libraries and binaries will go to /home/debian/Downloads/cado-nfs-2.3.0/installed/lib/cado-nfs-2.3.0
-- Data will go to /home/debian/Downloads/cado-nfs-2.3.0/installed/share/cado-nfs-2.3.0
-- Configuring done
-- Generating done
-- Build files have been written to: /home/debian/Descargas/cado-nfs-2.3.0/build/debian12

local.sh.macosx.x86_64:

# Examples

# Darwin <hostname> 12.5.0 Darwin Kernel Version 12.5.0: \
# Sep 29 13:33:47 PDT 2013; \
# root:xnu-2050.48.12~1/RELEASE_X86_64 x86_64 i386 \
# MacBookPro9,2 Darwin


# Darwin <hostname> 13.2.0 Darwin Kernel Version 13.2.0: \
# Thu Apr 17 23:03:13 PDT 2014; \
# root:xnu-2422.100.13~1/RELEASE_X86_64 x86_64 i386 \
# MacBookPro9,2 Darwin


############################################################
# The variables set below are specific to OSX.
# See local.sh.example for more configuration options,
# notably CFLAGS and CXXFLAGS
############################################################


############################################################
# cado-nfs (Block Wiedemann code) fails on OSX with
# shared libraries. Only static library should be built.

DISABLE_SHARED=1


############################################################
# CC: C Compiler

# CC=gcc
CC=clang

############################################################
# CXX: C++ Compiler (cado-nfs contains a few C++ programs)

# CXX=g++
CXX=clang++

gcc -v:

Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/12/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Configured with: ../src/configure -v --with-pkgversion='Debian 12.2.0-14' --with-bugurl=file:///usr/share/doc/gcc-12/README.Bugs --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-12 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-12-bTRWOB/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-bTRWOB/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-offload-defaulted --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu
Thread model: posix
Supported LTO compression algorithms: zlib zstd
gcc version 12.2.0 (Debian 12.2.0-14) 

I appreciate any help.

---

Por una Universidad de Excelencia y Solidaria