CGAL users discussion list

[hardik kabaria <>]

Dear Laurent, 

I have included the Poisson_reconstruction_function as a member of 

my class. 

However, when I try to compile a drive based off the class. I get compiling error: 

I have my makefile as following:

CC = g++

INCPATH = -I $(UMDIR)include/ -I /opt/local/include/

CFLAGS = -g 

LIBPATH = -L$(UMDIR)lib/ -L/opt/local/lib -lCurveGeom -lIBMesher3D -lAnn -lgsl -lgslcblas -lnlopt -lm -lCGAL -lCGAL_Core -lboost_system-mt -lboost_thread-mt

compactsurfmesh: compactsurfmesh.cpp

$(CC) $(INCPATH) $(LIBPATH) $(CFLAGS) $< -o $@

I have CGAL include files in the path (/opt/local/include) 

as well as the dylibs are inlcuded.

lrwxr-xr-x  1 hardik  wheel       42 Nov 30 13:06 libCGAL.dylib -> /usr/local/soft/CGAL-4.2/lib/libCGAL.dylib

lrwxr-xr-x  1 hardik  wheel       47 Nov 30 13:06 libCGAL_Core.dylib -> /usr/local/soft/CGAL-4.2/lib/libCGAL_Core.dylib

lrwxr-xr-x  1 hardik  wheel       50 Nov 30 13:06 libCGAL_ImageIO.dylib -> /usr/local/soft/CGAL-4.2/lib/libCGAL_ImageIO.dylib

Error:

  "___gmpq_add", referenced from:

      CGAL::Gmpq::operator+=(CGAL::Gmpq const&) in libCurveGeom.a(PoissonRecSurface.o)

  "___gmpq_clear", referenced from:

      CGAL::Gmpq_rep::~Gmpq_rep() in libCurveGeom.a(PoissonRecSurface.o)

  "___gmpq_cmp", referenced from:

Could you point me what am I missing ?

Thanks!

Hardik

On Fri, Nov 21, 2014 at 4:49 AM, Laurent Saboret <> wrote:

Dear Hardik,

My guess is that your problem comes from the compilation options, probably related to the linear solver (Eigen by default).

If you use CMake, make sure that your CMakeLists.txt looks like poisson_reconstruction_example.cpp example's CMakeLists.txt.
If you do not use CMake, I recommend you to recompile poisson_reconstruction_example.cpp and to cut and paste the compilation options generated by CMake into your own makefile.

Good luck,

Laurent Saboret

Le 19/11/2014 18:55, hardik kabaria a écrit :

Hi Laurent, 

Yes that's true. It is same as 

poisson_reconstruction_example.cpp example.

I am able to compile the example in the directory

examples/Surface_reconstruction_points_3/ however

I am interested in using these function in my own code and 

when I try to compile there it gives the following error. 

Any suggestions towards diagnosing the issue ?

Thanks, 

Hardik Kabaria

On Wed, Nov 19, 2014 at 5:00 AM, Laurent Saboret <> wrote:

Dear Hardik,

The code below seems a cut and paste of CGAL's poisson_reconstruction_example.cpp example.
Does poisson_reconstruction_example.cpp compile properly on your machine?

Best regards,
Laurent Saboret

Le 18/11/2014 20:18, hardik kabaria a écrit :

Hello, 

I am having some issues compiling an example from Surface reconstruction 

part. It'd be great if someone can point out what could be the issue. 

I am using Mac OS 10.8 and cgal 4.4

dn525jo5:poisson_rec hardik$ port list cgal

Warning: port definitions are more than two weeks old, consider updating them by running 'port selfupdate'.

cgal                           @4.4            gis/cgal

Compiling error: 

/usr/local/soft/UM++/hardik/3Dexamples/FromTrianles/brain/cowBrainModel/poisson_rec/poisson_reconstruction_withUMesh.cpp:64:21: error: no matching member function for call

      to 'compute_implicit_function'

    if ( ! function.compute_implicit_function() ) 

           ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~

/opt/local/include/CGAL/Poisson_reconstruction_function.h:375:8: note: candidate function template not viable: requires at least 2 arguments, but 0 were provided

  bool compute_implicit_function(

       ^

/opt/local/include/CGAL/Poisson_reconstruction_function.h:528:8: note: candidate function template not viable: requires at least argument 'solver', but no arguments were

      provided

  bool compute_implicit_function(SparseLinearAlgebraTraits_d solver, bool smoother_hole_filling = false)

       ^

Excerpt from the .cpp

  PointList points;

    std::ifstream stream("data/kitten.xyz");

    if (!stream ||

        !CGAL::read_xyz_points_and_normals(

                              stream,

                              std::back_inserter(points),

                              CGAL::make_normal_of_point_with_normal_pmap(PointList::value_type())))

    {

      std::cerr << "Error: cannot read file data/kitten.xyz" << std::endl;

      return EXIT_FAILURE;

    }

    // Creates implicit function from the read points using the default solver.

    // Note: this method requires an iterator over points

    // + property maps to access each point's position and normal.

    // The position property map can be omitted here as we use iterators over Point_3 elements.

    Poisson_reconstruction_function function(points.begin(), points.end(),

                                             CGAL::make_normal_of_point_with_normal_pmap(PointList::value_type()) );

    // Computes the Poisson indicator function f()

    // at each vertex of the triangulation.

    if ( ! function.compute_implicit_function() ) 

      return EXIT_FAILURE;

Thanks!

Hardik Kabaria

--

Hardik Kabaria
Ph.D. Candidate
Department of Mechanical Engineering
Stanford University

--

Hardik Kabaria
Ph.D. Candidate
Department of Mechanical Engineering
Stanford University

--

Hardik Kabaria
Ph.D. Candidate
Department of Mechanical Engineering
Stanford University