[Starpu-devel] StarPU CUDA configuration error

[王楠 <wangnan318@gmail.com>]

To whom it may concern,

I'm trying to configure the starpu on my mac. But I got the error message of "whether CUDA is working... CUDA found and can be compiled, but compiled application can not be run, is the CUDA path missing in LD_LIBRARY_PATH?" I tried the following command:

export LD_LIBRARY_PATH=/usr/local/cuda/lib:$LD_LIBRARY_PATH

as well as 

export DYLD_LIBRARY_PATH=/usr/local/cuda/lib:$DYLD_LIBRARY_PATH

but they did not work.

Here is my environment:

GCC

Configured with: /private/var/tmp/llvmgcc42/llvmgcc42-2336.11~182/src/configure --disable-checking --enable-werror --prefix=/Applications/Xcode.app/Contents/Developer/usr/llvm-gcc-4.2 --mandir=/share/man --enable-languages=c,objc,c++,obj-c++ --program-prefix=llvm- --program-transform-name=/^[cg][^.-]*$/s/$/-4.2/ --with-slibdir=/usr/lib --build=i686-apple-darwin11 --enable-llvm=/private/var/tmp/llvmgcc42/llvmgcc42-2336.11~182/dst-llvmCore/Developer/usr/local --program-prefix=i686-apple-darwin11- --host=x86_64-apple-darwin11 --target=i686-apple-darwin11 --with-gxx-include-dir=/usr/include/c++/4.2.1

Thread model: posix

gcc version 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.11.00)

NVCC

nvcc: NVIDIA (R) Cuda compiler driver

Copyright (c) 2005-2013 NVIDIA Corporation

Built on Wed_Jul_10_11:16:01_PDT_2013

Cuda compilation tools, release 5.5, V5.5.0

Configuration File:

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checking build system type... x86_64-apple-darwin12.5.0

checking host system type... x86_64-apple-darwin12.5.0

checking target system type... x86_64-apple-darwin12.5.0

checking for a BSD-compatible install... /usr/bin/install -c

checking whether build environment is sane... yes

checking for a thread-safe mkdir -p... build-aux/install-sh -c -d

checking for gawk... no

checking for mawk... no

checking for nawk... no

checking for awk... awk

checking whether make sets $(MAKE)... yes

checking whether make supports nested variables... yes

checking whether make supports nested variables... (cached) yes

checking for style of include used by make... GNU

checking for gcc... gcc

checking whether the C compiler works... yes

checking for C compiler default output file name... a.out

checking for suffix of executables... 

checking whether we are cross compiling... no

checking for suffix of object files... o

checking whether we are using the GNU C compiler... yes

checking whether gcc accepts -g... yes

checking for gcc option to accept ISO C89... none needed

checking whether gcc understands -c and -o together... yes

checking dependency style of gcc... gcc3

checking for ar... ar

checking the archiver (ar) interface... ar

checking for gcc... (cached) gcc

checking whether we are using the GNU C compiler... (cached) yes

checking whether gcc accepts -g... (cached) yes

checking for gcc option to accept ISO C89... (cached) none needed

checking whether gcc understands -c and -o together... (cached) yes

checking dependency style of gcc... (cached) gcc3

checking for g++... g++

checking whether we are using the GNU C++ compiler... yes

checking whether g++ accepts -g... yes

checking dependency style of g++... gcc3

checking how to run the C preprocessor... gcc -E

checking for a sed that does not truncate output... /usr/bin/sed

checking whether ln -s works... yes

checking for g77... no

checking for xlf... no

checking for f77... no

checking for frt... no

checking for pgf77... no

checking for cf77... no

checking for fort77... no

checking for fl32... no

checking for af77... no

checking for xlf90... no

checking for f90... no

checking for pgf90... no

checking for pghpf... no

checking for epcf90... no

checking for gfortran... gfortran

checking whether we are using the GNU Fortran 77 compiler... yes

checking whether gfortran accepts -g... yes

checking how to print strings... printf

checking for a sed that does not truncate output... (cached) /usr/bin/sed

checking for grep that handles long lines and -e... /usr/bin/grep

checking for egrep... /usr/bin/grep -E

checking for fgrep... /usr/bin/grep -F

checking for ld used by gcc... /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld

checking if the linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) is GNU ld... no

checking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm

checking the name lister (/opt/local/bin/nm) interface... BSD nm

checking the maximum length of command line arguments... 196608

checking whether the shell understands some XSI constructs... yes

checking whether the shell understands "+="... yes

checking how to convert x86_64-apple-darwin12.5.0 file names to x86_64-apple-darwin12.5.0 format... func_convert_file_noop

checking how to convert x86_64-apple-darwin12.5.0 file names to toolchain format... func_convert_file_noop

checking for /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld option to reload object files... -r

checking for objdump... no

checking how to recognize dependent libraries... pass_all

checking for dlltool... no

checking how to associate runtime and link libraries... printf %s\n

checking for archiver @FILE support... no

checking for strip... strip

checking for ranlib... ranlib

checking command to parse /opt/local/bin/nm output from gcc object... ok

checking for sysroot... no

checking for mt... no

checking if : is a manifest tool... no

checking for dsymutil... dsymutil

checking for nmedit... nmedit

checking for lipo... lipo

checking for otool... otool

checking for otool64... no

checking for -single_module linker flag... yes

checking for -exported_symbols_list linker flag... yes

checking for -force_load linker flag... yes

checking for ANSI C header files... yes

checking for sys/types.h... yes

checking for sys/stat.h... yes

checking for stdlib.h... yes

checking for string.h... yes

checking for memory.h... yes

checking for strings.h... yes

checking for inttypes.h... yes

checking for stdint.h... yes

checking for unistd.h... yes

checking for dlfcn.h... yes

checking for objdir... .libs

checking if gcc supports -fno-rtti -fno-exceptions... no

checking for gcc option to produce PIC... -fno-common -DPIC

checking if gcc PIC flag -fno-common -DPIC works... yes

checking if gcc static flag -static works... no

checking if gcc supports -c -o file.o... yes

checking if gcc supports -c -o file.o... (cached) yes

checking whether the gcc linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes

checking dynamic linker characteristics... darwin12.5.0 dyld

checking how to hardcode library paths into programs... immediate

checking whether stripping libraries is possible... yes

checking if libtool supports shared libraries... yes

checking whether to build shared libraries... yes

checking whether to build static libraries... yes

checking how to run the C++ preprocessor... g++ -E

checking for ld used by g++... /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld

checking if the linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) is GNU ld... no

checking whether the g++ linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes

checking for g++ option to produce PIC... -fno-common -DPIC

checking if g++ PIC flag -fno-common -DPIC works... yes

checking if g++ static flag -static works... no

checking if g++ supports -c -o file.o... yes

checking if g++ supports -c -o file.o... (cached) yes

checking whether the g++ linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes

checking dynamic linker characteristics... darwin12.5.0 dyld

checking how to hardcode library paths into programs... immediate

checking if libtool supports shared libraries... yes

checking whether to build shared libraries... yes

checking whether to build static libraries... yes

checking for gfortran option to produce PIC... -fno-common

checking if gfortran PIC flag -fno-common works... yes

checking if gfortran static flag -static works... no

checking if gfortran supports -c -o file.o... yes

checking if gfortran supports -c -o file.o... (cached) yes

checking whether the gfortran linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin11/4.2.1/ld) supports shared libraries... yes

checking dynamic linker characteristics... darwin12.5.0 dyld

checking how to hardcode library paths into programs... immediate

checking whether ln -s works... yes

checking for ANSI C header files... (cached) yes

checking for C/C++ restrict keyword... __restrict

checking for bash... /bin/sh

checking for svnversion... /usr/bin/svnversion

cp: ./STARPU-REVISION and ./STARPU-REVISION are identical (not copied).

checking for lib... no

checking size of void *... 8

checking for pthread_create in -lpthread... yes

checking for library containing sqrt... none required

checking for main in -lws2_32... no

checking for sysconf... yes

checking for pthread_spin_lock... no

checking for pthread_setaffinity_np... no

checking for posix_memalign... yes

checking for memalign... no

checking for drand48... yes

checking for erand48_r... no

checking for strerror_r... yes

checking for setenv... yes

checking for unsetenv... yes

checking for nearbyintf... yes

checking for rintf... yes

checking malloc.h usability... no

checking malloc.h presence... no

checking for malloc.h... no

checking valgrind/valgrind.h usability... no

checking valgrind/valgrind.h presence... no

checking for valgrind/valgrind.h... no

checking valgrind/helgrind.h usability... no

checking valgrind/helgrind.h presence... no

checking for valgrind/helgrind.h... no

checking for sched_yield... yes

checking whether the target supports __sync_val_compare_and_swap... yes

checking whether the target supports __sync_bool_compare_and_swap... yes

checking whether the target supports __sync_fetch_and_add... yes

checking whether the target supports __sync_fetch_and_or... yes

checking whether the target supports __sync_lock_test_and_set... yes

checking whether the target supports __sync_synchronize... yes

checking for library containing set_mempolicy... no

checking whether libnuma is available... no

checking maximum number of sched_ctxs... 10

checking maximum number of CPUs... 64

checking whether CPUs should be used... yes

checking maximum number of CUDA devices... 4

checking whether CUDA is available in /usr/local/cuda... 

checking cuda.h usability... yes

checking cuda.h presence... yes

checking for cuda.h... yes

checking whether CUDA is available with: -L/usr/local/lib... 

checking for main in -lcuda... no

checking whether CUDA is available... 

checking cuda.h usability... no

checking cuda.h presence... no

checking for cuda.h... no

checking whether CUDA is available in /usr/local/cuda... 

checking cuda.h usability... yes

checking cuda.h presence... yes

checking for cuda.h... yes

checking whether CUDA is available with: -L/usr/local/cuda/lib64... 

checking for main in -lcuda... no

checking whether CUDA is available with: -L/usr/local/cuda/lib... 

checking for main in -lcuda... yes

checking for main in -lcudart... yes

checking for main in -lcublas... yes

checking whether CUDA is working... CUDA found and can be compiled, but compiled application can not be run, is the CUDA path missing in LD_LIBRARY_PATH?

no

configure: error: cannot find CUDA

Any help will be appreciated, thank you.

--

best wishes,

Linnan  Wang
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Ph.D Candidate, Mechanical and Aerospace Engineering
School of Engineering
Rutgers, the State University of New Jersey

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