Re: [Starpu-devel] Compiling starpu on Mac OS

[tog <guillaume.alleon@gmail.com>]

Yes, I restarted everything from the very beginning.
Here are both logs

Regards
Guillaume

On Fri, Apr 1, 2011 at 7:01 PM, Nathalie Furmento
<nathalie.furmento@labri.fr> wrote:
> Looks like the new variable STARPU_CUDA_LDFLAGS has not been added when
> calling the linker. I might have forgotten to update some commands.
>
> I supposed you called again "autogen.sh" and "configure" ? Running make
> distclean might also help. Are you getting the error when calling make ?
> Could you please send its whole output ?
>
> Thanks,
>
> Nathalie
>
> On 01/04/2011 15:21, tog wrote:
>>
>> Hi,
>>
>> I did the update but still got a similar problem
>> Is there something I can do in order to help you ?
>>
>> Best Regards
>> Guillaume
>>
>>
>> oggy:starpu alleon$ svn update
>> U    mpi/Makefile.am
>> U    src/Makefile.am
>> U    src/datawizard/write_back.c
>> U    src/datawizard/coherency.c
>> U    tools/Makefile.am
>> D    tests/datawizard/wt_broadcast.c
>> D    tests/datawizard/wt_host.c
>> A    tests/opt
>> A    tests/opt/Makefile.am
>> A    tests/opt/datawizard
>> A    tests/opt/datawizard/wt_host.c
>> A    tests/opt/datawizard/wt_broadcast.c
>> U    tests/Makefile.am
>> U    configure.ac
>> U    Makefile.am
>> U    examples/stencil/Makefile.am
>> U    examples/Makefile.am
>> U    examples/starpufft/Makefile.am
>> Updated to revision 3436.
>>
>>
>> libtool: link: gcc -dynamiclib  -o .libs/libstarpu.0.dylib
>> .libs/libstarpu_la-barrier.o .libs/libstarpu_la-hash.o
>> .libs/libstarpu_la-htable32.o .libs/libstarpu_la-rwlock.o
>> .libs/libstarpu_la-starpu_spinlock.o .libs/libstarpu_la-timing.o
>> .libs/libstarpu_la-fxt.o .libs/libstarpu_la-utils.o
>> .libs/libstarpu_la-jobs.o .libs/libstarpu_la-task.o
>> .libs/libstarpu_la-task_bundle.o .libs/libstarpu_la-workers.o
>> .libs/libstarpu_la-combined_workers.o .libs/libstarpu_la-topology.o
>> .libs/libstarpu_la-debug.o .libs/libstarpu_la-errorcheck.o
>> .libs/libstarpu_la-progress_hook.o .libs/libstarpu_la-cg.o
>> .libs/libstarpu_la-dependencies.o
>> .libs/libstarpu_la-implicit_data_deps.o .libs/libstarpu_la-tags.o
>> .libs/libstarpu_la-task_deps.o .libs/libstarpu_la-htable.o
>> .libs/libstarpu_la-data_concurrency.o
>> .libs/libstarpu_la-perfmodel_history.o
>> .libs/libstarpu_la-perfmodel_bus.o .libs/libstarpu_la-perfmodel.o
>> .libs/libstarpu_la-regression.o .libs/libstarpu_la-sched_policy.o
>> .libs/libstarpu_la-priorities.o .libs/libstarpu_la-parallel_task.o
>> .libs/libstarpu_la-eager_central_policy.o
>> .libs/libstarpu_la-eager_central_priority_policy.o
>> .libs/libstarpu_la-work_stealing_policy.o
>> .libs/libstarpu_la-deque_modeling_policy_data_aware.o
>> .libs/libstarpu_la-heft.o .libs/libstarpu_la-random_policy.o
>> .libs/libstarpu_la-stack_queues.o .libs/libstarpu_la-deque_queues.o
>> .libs/libstarpu_la-fifo_queues.o
>> .libs/libstarpu_la-detect_combined_workers.o
>> .libs/libstarpu_la-parallel_heft.o
>> .libs/libstarpu_la-parallel_greedy.o
>> .libs/libstarpu_la-driver_common.o .libs/libstarpu_la-memory_nodes.o
>> .libs/libstarpu_la-write_back.o .libs/libstarpu_la-coherency.o
>> .libs/libstarpu_la-data_request.o .libs/libstarpu_la-progress.o
>> .libs/libstarpu_la-copy_driver.o .libs/libstarpu_la-filters.o
>> .libs/libstarpu_la-sort_data_handles.o .libs/libstarpu_la-memalloc.o
>> .libs/libstarpu_la-footprint.o .libs/libstarpu_la-datastats.o
>> .libs/libstarpu_la-user_interactions.o .libs/libstarpu_la-reduction.o
>> .libs/libstarpu_la-data_interface.o
>> .libs/libstarpu_la-bcsr_interface.o .libs/libstarpu_la-csr_interface.o
>> .libs/libstarpu_la-matrix_filters.o
>> .libs/libstarpu_la-matrix_interface.o
>> .libs/libstarpu_la-block_filters.o
>> .libs/libstarpu_la-block_interface.o
>> .libs/libstarpu_la-vector_interface.o
>> .libs/libstarpu_la-bcsr_filters.o .libs/libstarpu_la-csr_filters.o
>> .libs/libstarpu_la-vector_filters.o
>> .libs/libstarpu_la-variable_interface.o
>> .libs/libstarpu_la-void_interface.o .libs/libstarpu_la-malloc.o
>> .libs/libstarpu_la-execute_on_all.o
>> .libs/libstarpu_la-starpu_create_sync_task.o
>> .libs/libstarpu_la-starpu_cublas.o .libs/libstarpu_la-file.o
>> .libs/libstarpu_la-starpu_data_cpy.o
>> .libs/libstarpu_la-starpu_insert_task.o
>> .libs/libstarpu_la-starpu_insert_task_utils.o
>> .libs/libstarpu_la-starpu_task_list.o .libs/libstarpu_la-starpu_fxt.o
>> .libs/libstarpu_la-starpu_fxt_mpi.o
>> .libs/libstarpu_la-starpu_fxt_dag.o .libs/libstarpu_la-starpu_paje.o
>> .libs/libstarpu_la-latency.o .libs/libstarpu_la-structures_size.o
>> .libs/libstarpu_la-profiling.o .libs/libstarpu_la-bound.o
>> .libs/libstarpu_la-profiling_helpers.o .libs/libstarpu_la-driver_cpu.o
>> .libs/libstarpu_la-driver_cuda.o   -L/usr/local/cuda/lib -lm -lblas
>> -lpthread    -install_name  /usr/local/lib/libstarpu.0.dylib
>> -compatibility_version 1 -current_version 1.0 -Wl,-single_module
>> Undefined symbols:
>>   "_cudaThreadExit", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cudaMemcpy2D", referenced from:
>>       _copy_ram_to_cuda_async in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_ram_async in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_ram in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_cuda in libstarpu_la-matrix_interface.o
>>       _copy_ram_to_cuda in libstarpu_la-matrix_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_common in libstarpu_la-block_interface.o
>>       _copy_cuda_common in libstarpu_la-block_interface.o
>>   "_cudaMemcpy2DAsync", referenced from:
>>       _copy_ram_to_cuda_async in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_ram_async in libstarpu_la-matrix_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>   "_cudaFree", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _free_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _free_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _free_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _allocate_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _allocate_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _free_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _free_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _free_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _allocate_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _allocate_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _free_matrix_buffer_on_node in libstarpu_la-matrix_interface.o
>>       _free_block_buffer_on_node in libstarpu_la-block_interface.o
>>       _free_vector_buffer_on_node in libstarpu_la-vector_interface.o
>>       _free_variable_buffer_on_node in libstarpu_la-variable_interface.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cudaHostAlloc", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _malloc_pinned_cuda_codelet in libstarpu_la-malloc.o
>>   "_cudaEventCreate", referenced from:
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>   "_cublasShutdown", referenced from:
>>       _shutdown_cublas_func in libstarpu_la-starpu_cublas.o
>>   "_cudaMemcpy", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _copy_cuda_common in libstarpu_la-bcsr_interface.o
>>       _copy_cuda_common in libstarpu_la-bcsr_interface.o
>>       _copy_cuda_common in libstarpu_la-bcsr_interface.o
>>       _copy_cuda_common in libstarpu_la-csr_interface.o
>>       _copy_cuda_common in libstarpu_la-csr_interface.o
>>       _copy_cuda_common in libstarpu_la-csr_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_common in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_ram in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_cuda in libstarpu_la-vector_interface.o
>>       _copy_ram_to_cuda in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_ram_async in libstarpu_la-variable_interface.o
>>       _copy_cuda_to_ram in libstarpu_la-variable_interface.o
>>       _copy_ram_to_cuda_async in libstarpu_la-variable_interface.o
>>       _copy_cuda_to_cuda in libstarpu_la-variable_interface.o
>>       _copy_ram_to_cuda in libstarpu_la-variable_interface.o
>>   "_cudaEventSynchronize", referenced from:
>>       __starpu_driver_wait_request_completion in
>> libstarpu_la-copy_driver.o
>>   "_cudaThreadSynchronize", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>   "_cudaEventRecord", referenced from:
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>   "_cudaMemcpyAsync", referenced from:
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_ram_async in libstarpu_la-variable_interface.o
>>       _copy_ram_to_cuda_async in libstarpu_la-variable_interface.o
>>   "_cudaGetErrorString", referenced from:
>>       __starpu_driver_wait_request_completion in
>> libstarpu_la-copy_driver.o
>>       __starpu_driver_wait_request_completion in
>> libstarpu_la-copy_driver.o
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>       __starpu_driver_copy_data_1_to_1 in libstarpu_la-copy_driver.o
>>       _copy_cuda_common in libstarpu_la-bcsr_interface.o
>>       _copy_cuda_common in libstarpu_la-bcsr_interface.o
>>       _copy_cuda_common in libstarpu_la-bcsr_interface.o
>>       _copy_cuda_common in libstarpu_la-csr_interface.o
>>       _copy_cuda_common in libstarpu_la-csr_interface.o
>>       _copy_cuda_common in libstarpu_la-csr_interface.o
>>       _copy_ram_to_cuda_async in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_ram_async in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_ram in libstarpu_la-matrix_interface.o
>>       _free_matrix_buffer_on_node in libstarpu_la-matrix_interface.o
>>       _allocate_matrix_buffer_on_node in libstarpu_la-matrix_interface.o
>>       _copy_cuda_to_cuda in libstarpu_la-matrix_interface.o
>>       _copy_ram_to_cuda in libstarpu_la-matrix_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-block_interface.o
>>       _copy_cuda_common in libstarpu_la-block_interface.o
>>       _copy_cuda_common in libstarpu_la-block_interface.o
>>       _copy_cuda_common in libstarpu_la-block_interface.o
>>       _free_block_buffer_on_node in libstarpu_la-block_interface.o
>>       _allocate_block_buffer_on_node in libstarpu_la-block_interface.o
>>       _copy_cuda_async_common in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_ram in libstarpu_la-vector_interface.o
>>       _allocate_vector_buffer_on_node in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_cuda in libstarpu_la-vector_interface.o
>>       _copy_ram_to_cuda in libstarpu_la-vector_interface.o
>>       _copy_cuda_to_ram_async in libstarpu_la-variable_interface.o
>>       _copy_cuda_to_ram in libstarpu_la-variable_interface.o
>>       _allocate_variable_buffer_on_node in
>> libstarpu_la-variable_interface.o
>>       _copy_ram_to_cuda_async in libstarpu_la-variable_interface.o
>>       _copy_cuda_to_cuda in libstarpu_la-variable_interface.o
>>       _copy_ram_to_cuda in libstarpu_la-variable_interface.o
>>       _free_pinned_cuda_codelet in libstarpu_la-malloc.o
>>       _malloc_pinned_cuda_codelet in libstarpu_la-malloc.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cudaEventDestroy", referenced from:
>>       __starpu_driver_test_request_completion in
>> libstarpu_la-copy_driver.o
>>       __starpu_driver_wait_request_completion in
>> libstarpu_la-copy_driver.o
>>   "_cudaMemset", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>   "_cudaEventQuery", referenced from:
>>       __starpu_driver_test_request_completion in
>> libstarpu_la-copy_driver.o
>>   "_cudaGetDeviceCount", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       __starpu_load_bus_performance_files in libstarpu_la-perfmodel_bus.o
>>       __starpu_load_bus_performance_files in libstarpu_la-perfmodel_bus.o
>>       __starpu_get_cuda_device_count in libstarpu_la-driver_cuda.o
>>       __starpu_init_cuda in libstarpu_la-driver_cuda.o
>>   "_cudaFreeHost", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _free_pinned_cuda_codelet in libstarpu_la-malloc.o
>>   "_cudaGetDeviceProperties", referenced from:
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cudaMalloc", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       _allocate_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _allocate_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _allocate_bcsr_buffer_on_node in libstarpu_la-bcsr_interface.o
>>       _allocate_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _allocate_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _allocate_csr_buffer_on_node in libstarpu_la-csr_interface.o
>>       _allocate_matrix_buffer_on_node in libstarpu_la-matrix_interface.o
>>       _allocate_block_buffer_on_node in libstarpu_la-block_interface.o
>>       _allocate_vector_buffer_on_node in libstarpu_la-vector_interface.o
>>       _allocate_variable_buffer_on_node in
>> libstarpu_la-variable_interface.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cudaStreamDestroy", referenced from:
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cublasSetKernelStream", referenced from:
>>       _init_cublas_func in libstarpu_la-starpu_cublas.o
>>   "_cudaStreamSynchronize", referenced from:
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cublasInit", referenced from:
>>       _init_cublas_func in libstarpu_la-starpu_cublas.o
>>   "_cudaSetDevice", referenced from:
>>       _benchmark_all_gpu_devices in libstarpu_la-perfmodel_bus.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>   "_cudaStreamCreate", referenced from:
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>>       __starpu_cuda_worker in libstarpu_la-driver_cuda.o
>> ld: symbol(s) not found
>> collect2: ld returned 1 exit status
>> make[2]: *** [libstarpu.la] Error 1
>> make[1]: *** [all-recursive] Error 1
>> make: *** [all-recursive] Error 1
>>
>>
>>
>>
>
>



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